PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00356g00027.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WOX
Protein Properties Length: 201aa    MW: 23257.4 Da    PI: 9.7493
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00356g00027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.73e-211069357
                              --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                  Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                              +R+++tkeq++ Le+l+++  r+psae++++++++l    +++ ++V++WFqN++a++++
  Peinf101Scf00356g00027.1 10 SRWNPTKEQIDLLENLYKQgIRTPSAEQIQQITMRLkafgHIEGKNVFYWFQNHKARQRQ 69
                              7*****************99**************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.981570IPR001356Homeobox domain
SuperFamilySSF466892.87E-13777IPR009057Homeodomain-like
SMARTSM003893.2E-6774IPR001356Homeobox domain
PfamPF000466.3E-191069IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.608.1E-91069IPR009057Homeodomain-like
CDDcd000861.34E-61171No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MNDNMSPTGS RWNPTKEQID LLENLYKQGI RTPSAEQIQQ ITMRLKAFGH IEGKNVFYWF  60
QNHKARQRQK QKQDHIAYKF NRFLHRTCVF PPSCPKVVCS PYYAPQSDLG FYQQCSVPRI  120
ILRGPGVFIR RRAACDAPAV YVGTNDANDH CQETSGMVEH LSPNAKQYNT NINQETLNLF  180
PLHPTGVLQE RTSTTRHKLF F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016453563.11e-91PREDICTED: WUSCHEL-related homeobox 2-like
SwissprotQ6X7K11e-47WOX2_ARATH; WUSCHEL-related homeobox 2
TrEMBLK4C9W17e-77K4C9W1_SOLLC; Uncharacterized protein
TrEMBLM1CZ366e-77M1CZ36_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000779472e-76(Solanum tuberosum)
STRINGSolyc06g076000.1.12e-76(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA114141925
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.17e-49WUSCHEL related homeobox 2